CDS

Accession Number TCMCG066C16215
gbkey CDS
Protein Id XP_034591333.1
Location 30316773..30317807
Gene LOC117853077
GeneID 117853077
Organism Setaria viridis

Protein

Length 344aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034735442.1
Definition U5 small nuclear ribonucleoprotein 40 kDa protein [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description WD domain, G-beta repeat
KEGG_TC -
KEGG_Module M00354        [VIEW IN KEGG]
M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12857        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005682        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTCTCTGCTCCAGGCAACAATTCTTTGGCTCTTGCAGCCCCAAGGCCAGGGATGGAGCTGGCTAATGTTCAACAGCATCCAAATCAGGCCCTTGGGCCTGGTGGAAAGCAACGCACATCCAGTCTGGAGGCACCAATAATGCTACTTACAGGCCACCAGAGTGCTATCTACTGCATGAAGTTCAACCCTGCTGGAACCGTGATAGCATCAGGTTCCCATGACAAGGATATCTTCTTATGGTATGTCCACGGTGAGTGCAAGAACTTCATGGTACTGAGAGGGCACAAGAATGCTATTCTTGACCTTCAGTGGACTACCGATGGGACCCAGATAATCTCCGCAAGTCCTGACAAGACTGTGAGGGTGTGGGATGTTGAGACTGGCAAGCAAGTTAAGAAGATGGCTGAGCACTCGTCGTTTGTCAACTCATGTTGCCCAGCACGCAAGTGGCCGCCTCTTGTTGTGAGCGGTTCAGATGACGGTACTGCAAAGCTGTGGGACTTGCGTCAGAGAGGTGCAATTCAAACTCTCCCTGACAAATACCAGATCACAGCCGTTAGCTTCTCGGAGGCAGCAGATAAGGTATTCACCGGTGGCCTGGACAATGACGTCAAGTGGTGGGATCTTCGCAAGAATGAAGTGACAGAGTATCTCAAAGGACATCAGGACATGATCACTGGAATGCAGCTTAGTCCTGATGGCTCTTACCTCCTGACCAACGCAATGGACAATGAGCTCAAGATCTGGGATCTGCGCCCTTACGCTCCAGAGAACCGGAACATCAAGACCCTTACAGGCCACCAGCACAACTTTGAGAAGAACCTGTTGAAGTGCAGCTGGTCACCAGATAACCGCAAGGTCACTGCTGGGAGCGCTGACCGCATGGTCTACATCTGGGACACGACATCGAGGCGGATCCTGTACAAGCTTCCTGGGCACAACGGTTCGGTCAACGAGACTGCTTTCCACCCCACCGAGCCGATCATTGGGTCCTGCGGCAGCGACAAGCAGATCTACCTTGGGGAACTTTAA
Protein:  
MFSAPGNNSLALAAPRPGMELANVQQHPNQALGPGGKQRTSSLEAPIMLLTGHQSAIYCMKFNPAGTVIASGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDKTVRVWDVETGKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDKYQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWDTTSRRILYKLPGHNGSVNETAFHPTEPIIGSCGSDKQIYLGEL